ncRNA ID | novel_gma_miR7843 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:51165-51275 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451615 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AGCAAAGCAACUUCUGGUCCG - 21 |
Stem-loop(if miRNA) |
--A               A           U  ----U    CAGAAGUUUCUAGAA    ACCAGAAGUUGCUUU CUAGAACUCUC CA     GAAC               U    ||||||||||||||| ||||||||||| ||     ||||               U    UGGUCUUCAACGAAA GAUCUUGAGAG GU     UCUU               A GCC               C           U  UUGUU    AUCAAUGUUACCUUG |
Stem-loop sequence | AACCAGAAGUUGCUUUACUAGAACUCUCUCAUGAACCAGAAGUUUCUAGAAUUAGUUCCAUUGUAACUAUUCUUUGUUUGUGAGAGUUCUAGCAAAGCAACUUCUGGUCCG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014768314.1 |
|
2.0 | PREDICTED: Glycine max uncharacterized LOC100798669 (LOC100798669), transcript variant X2, mRNA | uncharacterized LOC100798669(LOC100798669) | coding protein | psRNATarget | |||||||||
XM_014768313.1 |
|
2.0 | PREDICTED: Glycine max uncharacterized LOC100798669 (LOC100798669), transcript variant X1, mRNA | uncharacterized LOC100798669(LOC100798669) | coding protein | psRNATarget |