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BaseInfo

ncRNA ID novel_gma_miR7843
Species Glycine max
Class miRNA
Genome position Chr1:51165-51275 [-]
Reference genome Glycine_max_v2.0
Source SRR1451615
Length 21
Mature sequence(if miRNA) 1 - AGCAAAGCAACUUCUGGUCCG - 21
Stem-loop(if miRNA) --A               A           U  ----U    CAGAAGUUUCUAGAA
   ACCAGAAGUUGCUUU CUAGAACUCUC CA     GAAC               U
   ||||||||||||||| ||||||||||| ||     ||||               U
   UGGUCUUCAACGAAA GAUCUUGAGAG GU     UCUU               A
GCC               C           U  UUGUU    AUCAAUGUUACCUUG
Stem-loop sequence AACCAGAAGUUGCUUUACUAGAACUCUCUCAUGAACCAGAAGUUUCUAGAAUUAGUUCCAUUGUAACUAUUCUUUGUUUGUGAGAGUUCUAGCAAAGCAACUUCUGGUCCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014768314.1
ncRNA:21   GCCUGGUCUUCAACGAAACGA   1
  =**|*||||||||||||||||
targets:1516   UCCAACAGAAGUUGCUUUGCU   1536

2.0 PREDICTED: Glycine max uncharacterized LOC100798669 (LOC100798669), transcript variant X2, mRNA uncharacterized LOC100798669(LOC100798669) coding protein psRNATarget
XM_014768313.1
ncRNA:21   GCCUGGUCUUCAACGAAACGA   1
  =**|*||||||||||||||||
targets:1576   UCCAACAGAAGUUGCUUUGCU   1596

2.0 PREDICTED: Glycine max uncharacterized LOC100798669 (LOC100798669), transcript variant X1, mRNA uncharacterized LOC100798669(LOC100798669) coding protein psRNATarget