ncRNA ID | novel_gma_miR2536 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr16:7276431-7276524 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451658 |
Length | 25 |
Mature sequence(if miRNA) | 1 - AAAAAAUAAGAGACUAAAAGUGAGC - 25 |
Stem-loop(if miRNA) |
--        C        AC                    A    U   UUACUUUU GUCUUUUA  UUUUUUCAUUUUUAUUUUUA UUUU U   |||||||| ||||||||  |||||||||||||||||||| ||||   AGUGAAAA CAGAGAAU  AAAAAAGUAGAAAUGAAAAU AAGG A CG        U        AA                    C    A |
Stem-loop sequence | UUACUUUUCGUCUUUUAACUUUUUUCAUUUUUAUUUUUAAUUUUUUAAGGAACUAAAAGUAAAGAUGAAAAAAAAUAAGAGACUAAAAGUGAGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003527889.3 |
|
2.0 | PREDICTED: Glycine max TLC domain-containing protein 2-like (LOC100786028), mRNA | TLC domain-containing protein 2-like(LOC100786028) | coding protein | psRNATarget | |||||||||
XM_014775382.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100814894 (LOC100814894), mRNA | uncharacterized LOC100814894(LOC100814894) | coding protein | psRNATarget | |||||||||
XM_003536114.3 |
|
2.5 | PREDICTED: Glycine max aspartic proteinase-like protein 2 (LOC100804123), transcript variant X1, mRNA | aspartic proteinase-like protein 2(LOC100804123) | coding protein | psRNATarget |