ncRNA ID |
osa_circ_037219 |
Species |
Oryza sativa |
Class |
circRNA |
Genome position |
8:21510206-21510558[-] |
Reference genome |
RGAPv7 |
Source |
PlantcircBase
|
Method |
SMALT and Segemehl/find_circ/circseq_cup/NA |
Type |
exonic |
Splice junction sequence |
CTGGTGGGGACAGGGTACTCGGGGAAGAGCTTGGCGAGGATGCGGACGACACCCTCGCGGTGGAGGACAGACTCGGCGCAGAGGAAGCGGCCGGCGGCGGTCACCAGCACCGGGTTCACCACCACCAGCTCCACCCCTCGCCGCCGCGCCGCCTCCCACGCCGCCTGCTCCGCCACCGCCTTCCCGTAGCAGTACCAGTT |
Tissues |
leaf and panicle/root/root/shoot, root, anther, seed, pistil |
Exon boundary |
Yes-Yes |
Splicing signals |
AC-CT |
circRNA sequence |
CTGGTGGGGACAGGGTACTCGGGGAAGAGCTTGGCGAGGATGCGGACGACACCCTCGCGGTGGAGGACAGACTCGGCGCAGAGGAAGCGGCCGGCGGCGGAAGGGGACTCGAAGACGAGGAGGTGGGCGGCGGCGACGTCGCGGACGTCGACGTAGGCCTGGACGGCGTTGGCGAACTTGCTGGCCGAGCCGTCCAGGTACTTGAGGATGTGGGCGACGCTGGCGTTCACCGTCGGCTGCAGCAGCGGCCCGATCACCAGCACCGGGTTCACCACCACCAGCTCCACCCCTCGCCGCCGCGCCGCCTCCCACGCCGCCTGCTCCGCCACCGCCTTCCCGTAGCAGTACCAGTT |
Genomic sequence |
CTGGTGGGGACAGGGTACTCGGGGAAGAGCTTGGCGAGGATGCGGACGACACCCTCGCGGTGGAGGACAGACTCGGCGCAGAGGAAGCGGCCGGCGGCGGAAGGGGACTCGAAGACGAGGAGGTGGGCGGCGGCGACGTCGCGGACGTCGACGTAGGCCTGGACGGCGTTGGCGAACTTGCTGGCCGAGCCGTCCAGGTACTTGAGGATGTGGGCGACGCTGGCGTTCACCGTCGGCTGCAGCAGCGGCCCGATCACCAGCACCGGGTTCACCACCACCAGCTCCACCCCTCGCCGCCGCGCCGCCTCCCACGCCGCCTGCTCCGCCACCGCCTTCCCGTAGCAGTACCAGTT |