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BaseInfo

ncRNA ID	novel_ath_miR1083
Species	Arabidopsis thaliana
Class	miRNA
Genome position	Chr2:2938752-2938802 [-]
Reference genome	TAIR10
Source	SRR1312899
Length	23
Mature sequence(if miRNA)	1 - ACUUGUUGAAUCGAUAGAGAACC - 23
Stem-loop(if miRNA)	--          CU   CC      A   UUCUCUAUCG  UUC  AUAAGU C   ||||||||||  |||  |||||| A   AAGAGAUAGC  AAG  UGUUCA A CC          -U   -U      C
Stem-loop sequence	UUCUCUAUCGCUUUCCCAUAAGUACAACACUUGUUGAAUCGAUAGAGAACC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001336486.1	ncRNA:23   CCAAGAGAUAGCUAAGUUGUUCA   1   **||||||*|||||||||*|||| targets:556   CUUUCUCUUUCGAUUCAAGAAGU   578 Target Full Sequence	2.5	Arabidopsis thaliana SCAR family protein mRNA	SCAR family protein(AT2G34150)	coding protein	psRNATarget
AY743926.1	ncRNA:23   CCAAGAGAUAGCUAAGUUGUUCA   1   **||||||*|||||||||*|||| targets:710   CUUUCUCUUUCGAUUCAAGAAGU   732 Target Full Sequence	2.5	Arabidopsis thaliana SCAR1 (SCAR1) mRNA, complete cds	NA	coding protein	psRNATarget
NM_001336488.1	ncRNA:23   CCAAGAGAUAGCUAAGUUGUUCA   1   **||||||*|||||||||*|||| targets:595   CUUUCUCUUUCGAUUCAAGAAGU   617 Target Full Sequence	2.5	Arabidopsis thaliana SCAR family protein mRNA	SCAR family protein(AT2G34150)	coding protein	psRNATarget
NM_001336487.1	ncRNA:23   CCAAGAGAUAGCUAAGUUGUUCA   1   **||||||*|||||||||*|||| targets:599   CUUUCUCUUUCGAUUCAAGAAGU   621 Target Full Sequence	2.5	Arabidopsis thaliana SCAR family protein mRNA	SCAR family protein(AT2G34150)	coding protein	psRNATarget
BK005566.1	ncRNA:23   CCAAGAGAUAGCUAAGUUGUUCA   1   **||||||*|||||||||*|||| targets:929   CUUUCUCUUUCGAUUCAAGAAGU   951 Target Full Sequence	2.5	TPA_exp: Arabidopsis thaliana SCAR1 (SCAR1) mRNA, complete cds	NA	coding protein	psRNATarget
BT002929.1	ncRNA:23   CCAAGAGAUAGCUAAGUUGUUCA   1   **||||||*|||||||||*|||| targets:948   CUUUCUCUUUCGAUUCAAGAAGU   970 Target Full Sequence	2.5	Arabidopsis thaliana clone RAFL14-84-F05 (R20213) unknown protein (At2g34150) mRNA, complete cds	NA	coding protein	psRNATarget
NM_179894.2	ncRNA:23   CCAAGAGAUAGCUAAGUUGUUCA   1   **||||||*|||||||||*|||| targets:948   CUUUCUCUUUCGAUUCAAGAAGU   970 Target Full Sequence	2.5	Arabidopsis thaliana SCAR family protein mRNA	SCAR family protein(AT2G34150)	coding protein	psRNATarget
NM_001036397.3	ncRNA:23   CCAAGAGAUAGCUAAGUUGUUCA   1   **||||||*|||||||||*|||| targets:922   CUUUCUCUUUCGAUUCAAGAAGU   944 Target Full Sequence	2.5	Arabidopsis thaliana SCAR family protein mRNA	SCAR family protein(AT2G34150)	coding protein	psRNATarget