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BaseInfo

ncRNA ID novel_ath_miR1065
Species Arabidopsis thaliana
Class miRNA
Genome position Chr5:15207019-15207176 [+]
Reference genome TAIR10
Source SRR1312888
Length 24
Mature sequence(if miRNA) 1 - GCUUAAAAAACGAUUGUAAAUCUU - 24
Stem-loop(if miRNA) --   UA      GA         -UUG       AUUGUAAAAAG          A    C    -G        --G    UUUAA
  GCU  AAAAAC  UUGUAAAUC    UAAAACU           UUUUAAAAUG UUUA AAAG  UUUAAAAA   GGGU     A
  |||  ||||||  |||||||||    |||||||           |||||||||| |||| ||||  ||||||||   ||||
  CGA  UUUUUG  AACAUUUAG    AUUUUGG           AGAAUUUUAU AAAU UUUC  AAAUUUUU   UCCA     G
AA   --      GG         UAAA       -----------          -    A    AG        GUA    UUUAU
Stem-loop sequence GCUUAAAAAACGAUUGUAAAUCUUGUAAAACUAUUGUAAAAAGUUUUAAAAUGAUUUACAAAGGUUUAAAAAGGGGUUUUAAAGUAUUUACCUAUGUUUUUAAAGACUUUAUAAAUAUUUUAAGAGGUUUUAAAAUGAUUUACAAGGGUUUUUAGCAA