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BaseInfo

ncRNA ID novel_ath_miR1064
Species Arabidopsis thaliana
Class miRNA
Genome position Chr4:2770104-2770185 [-]
Reference genome TAIR10
Source SRR1312888
Length 24
Mature sequence(if miRNA) 59 - UGCUAAGAUUUGUGAAGAAAGAGC - 82
Stem-loop(if miRNA) --U                    AGCUC         AA U
   GCUAAGAUUUGUGAAGAAAG     UUAUAUAAG  U U
   ||||||||||||||||||||     |||||||||  |
   CGAUUCUAAACACUUUUUUC     AAUAUAUUC  A U
AUC                    AUUUU         GG U
Stem-loop sequence UGCUAAGAUUUGUGAAGAAAGAGCUCUUAUAUAAGAAUUUUUAGGCUUAUAUAAUUUUACUUUUUUCACAAAUCUUAGCCUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_126559.1
ncRNA:24   CGAGAAAGAAGUGUUUAGAAUCGU   1
  *=|||*|=|*||||||||||||||
targets:986   UUUCUCUUUACACAAAUCUUAGCA   1009

3.0 Arabidopsis thaliana F-box associated ubiquitination effector family protein partial mRNA F-box associated ubiquitination effector family protein(AT2G05360) coding protein psRNATarget