ncRNA ID | novel_ath_miR1059 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr4:3554455-3554544 [+] |
Reference genome | TAIR10 |
Source | SRR1266871 |
Length | 24 |
Mature sequence(if miRNA) | 67 - CUUGGUAGAAAGUGUUAGGUUUGU - 90 |
Stem-loop(if miRNA) |
--        -       U      C UAU   ACUU     UGU  G   AAACCUAA ACUUUCU UCAAGC C   AUC    GUGAG   CU U   |||||||| ||||||| |||||| |   |||    |||||   ||   UUUGGAUU UGAAAGA GGUUCG G   UAG    UAUUC   GG G UG        G       U      A --U   -CUU     --U  A |
Stem-loop sequence | AAACCUAAACUUUCUUUCAAGCCCUAUAUCACUUGUGAGUGUCUGUGAGGUCUUAUUUCGAUUGAGCUUGGUAGAAAGUGUUAGGUUUGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EF183005.1 |
|
0.0 | Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence | NA | coding protein | psRNATarget | |||||||||
AK230139.1 |
|
0.0 | Arabidopsis thaliana mRNA for hypothetical protein, clone: RAFL22-82-O04 | NA | coding protein | psRNATarget |