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BaseInfo

ncRNA ID novel_ath_miR1056
Species Arabidopsis thaliana
Class miRNA
Genome position Chr3:11350149-11350242 [-]
Reference genome TAIR10
Source SRR1266870
Length 25
Mature sequence(if miRNA) 70 - UAUGAUUUCGGUUGUUAUGUGUCCU - 94
Stem-loop(if miRNA) --                             C    C  U  AACAC
  UAUGAUUUCGGUUGUUAUGUGUCCUUUUG UAUG UU UG     A
  ||||||||||||||||||||||||||||| |||| || ||     G
  AUACUAAAGCCAACAAUACACAGGAAAAC AUAC AA AC     C
CC                             A    -  U  AAGAU
Stem-loop sequence UAUGAUUUCGGUUGUUAUGUGUCCUUUUGCUAUGCUUUUGAACACAGCUAGAACAUAACAUAACAAAAGGACACAUAACAACCGAAAUCAUACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001339025.1
ncRNA:25   UCCUGUGUAUUGUUGGCUUUAGUAU   1
  |||||||||||||||||||||||||
targets:932   AGGACACAUAACAACCGAAAUCAUA   956

0.0 Arabidopsis thaliana hypothetical protein partial mRNA hypothetical protein(AT3G29455) coding protein psRNATarget