ncRNA ID | novel_ath_miR1053 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr2:15611883-15611974 [+] |
Reference genome | TAIR10 |
Source | SRR1266869;SRR1266870;SRR1266871;SRR1312896 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UGAGAUGAAAUCUUUGAUUGG - 21 |
Stem-loop(if miRNA) |
--                     A      ----AU   GACGAUGCU   UGAGAUGAAAUCUUUGAUUGG AAUUUC      GUA         A   ||||||||||||||||||||| ||||||      |||   AUUCUACUUUAGAAAUUAACC UUAAAG      AGU         U UC                     C      AAAACC   AUACCCCAC |
Stem-loop sequence | UGAGAUGAAAUCUUUGAUUGGAAAUUUCAUGUAGACGAUGCUAUCACCCCAUAUGACCAAAAGAAAUUCCCAAUUAAAGAUUUCAUCUUACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001336640.1 |
|
2.5 | Arabidopsis thaliana Transducin/WD40 repeat-like superfamily protein mRNA | Transducin/WD40 repeat-like superfamily protein(AT2G37160) | coding protein | psRNATarget |