ncRNA ID | novel_ath_miR1052 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr1:18548142-18548325 [-] |
Reference genome | TAIR10 |
Source | ERR1297320 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GUGACUAUUUUGCAAAUUAUGAAU - 24 |
Stem-loop(if miRNA) |
--                                                                               ---   U    G   UCAUAAUUUGCAAAAUAGUCACUUUUCACUGUUUGAUUCGUACACUUGGAUUGUACAUCACUUUUAGUGUACAAAUGUA   AAA GUAC C   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||| |||| U   AGUAUUAAACGUUUUAUCAGUGAAAAGUGACAAACUAAGCAUGUGAACCUAACAUGUAGUGAAAAUCACAUGUUUAUAU   UUU UAUG G UA                                                                               AUA   U    U |
Stem-loop sequence | UCAUAAUUUGCAAAAUAGUCACUUUUCACUGUUUGAUUCGUACACUUGGAUUGUACAUCACUUUUAGUGUACAAAUGUAAAAUGUACGCUGUGUAUUUUUAUAUAUAUUUGUACACUAAAAGUGAUGUACAAUCCAAGUGUACGAAUCAAACAGUGAAAAGUGACUAUUUUGCAAAUUAUGAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_105281.3 |
|
2.5 | Arabidopsis thaliana Plant thionin mRNA | Plant thionin(AT1G66100) | coding protein | psRNATarget |