ncRNA ID | novel_ath_miR1002 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr4:12217455-12217513 [-] |
Reference genome | TAIR10 |
Source | SRR1266004 |
Length | 21 |
Mature sequence(if miRNA) | 1 - CGGCUCUGAUACCAAUUGAUG - 21 |
Stem-loop(if miRNA) |
--       C          A   CU  G   UCGAUUG UGUCAGAGCC CGC  AU A   ||||||| |||||||||| |||  || A   AGUUAAC AUAGUCUCGG GUG  UA G GU       C          C   UU  A |
Stem-loop sequence | UCGAUUGCUGUCAGAGCCACGCCUAUGAAGAAUUUGUGCGGCUCUGAUACCAAUUGAUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AY168992.1 |
|
3.0 | Arabidopsis thaliana hypothetical protein (T17H1.21) mRNA, complete cds | NA | coding protein | psRNATarget |