Search result

BaseInfo

ncRNA ID novel_ath_miR991
Species Arabidopsis thaliana
Class miRNA
Genome position Chr5:9396605-9396780 [-]
Reference genome TAIR10
Source SRR1266003
Length 24
Mature sequence(if miRNA) 1 - AAAACCCUUUAAAAAUCUCUUGUA - 24
Stem-loop(if miRNA) --           A     A   AA      U      G A             AC         -   -    UU  AA       UA
  CAAGGGAUUUU AAAGG UUU  AAAAAU UACAAA G UUUUAAAAGAUUU  AAAGGAUUU UAA AAGG  UU  AAAGAUU  C
  ||||||||||| ||||| |||  |||||| |||||| | |||||||||||||  ||||||||| ||| ||||  ||  |||||||
  GUUCUCUAAAA UUUCC AAA  UUUUUA AUGUUU C AAAAUUUUCUAAA  UUUCUUAAA GUU UUCU  GA  UUUUUGA  A
AU           A     C   AC      C      A A             AA         U   C    GG  AA       CA
Stem-loop sequence CAAGGGAUUUUAAAAGGAUUUAAAAAAAUUUACAAAGGAUUUUAAAAGAUUUACAAAGGAUUUUAAAAGGUUUUAAAAAGAUUUACAACAGUUUUUAAAGGGUCUUCUUGUAAAUUCUUUAAAAAUCUUUUAAAAACAUUUGUACAUUUUUCAAAACCCUUUAAAAAUCUCUUGUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_114323.4
ncRNA:24   AUGUUCUCUAAAAAUUUCCCAAAA   1
  ||||||=||||||*||||||||||
targets:2484   UACAAGGGAUUUUAAAAGGGUUUU   2507

2.5 Arabidopsis thaliana fatty acid reductase 5 (FAR5), mRNA fatty acid reductase 5(FAR5) coding protein psRNATarget
NM_114323.4
ncRNA:24   AUGUUCUCUAAAAAUUUCCCAAAA   1
  ||||||=||||||*||||||||||
targets:2516   UACAAGGGAUUUUAAAAGGGUUUU   2539

2.5 Arabidopsis thaliana fatty acid reductase 5 (FAR5), mRNA fatty acid reductase 5(FAR5) coding protein psRNATarget